Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847543.1_cds_XP_016510105.1_22979
CDS Infomation

[gene=LOC107827477] [db_xref=GeneID:107827477] [protein=probable xyloglucan glycosyltransferase 12] [protein_id=XP_016510105.1] [location=join(27752..28474,28705..29013,29203..29493,29596..29709,29806..30435)] [gbkey=CDS]
Sequence

ATGGCACAATCCTTTAGCTGGTGGGGTAAAGAAATTCAAAGGGGTACCCCTGTGGTGGTG
AAAATGGAGAACCCAAATAACTGGTCCATGGTTGAGTTACAAAGTCCATCAGATGATGAT
TTTCTGTTAACAAAAGGTGAAAAGGTGAAAAACAAGAATGCAAAACAGCTCACATGGGTT
CTTCTTCTTAAGGCACATAAAGCAGCAGGTTGCTTAACTTCAATTGCCTCTGCATTGTTC
AGTCTTGGCTCTGTTATTCACCGCCGTGTTGCCACCGGAAGAACAGATTCTTCTACCGTT
AATAGCCGGTTTTATATTTGTATAAAGGTCTTCCTTTGGTTATCTTTAATCTTGTTAGGT
TTTGAGATAGCTGCATATTATAAAGGTTGGCACTTTAGTGCTTCAGAGTTTCAAATTCAG
CATTTGTACACATTGGCTAATCCATTAGCTGTAAAGGGTGTGTTTGATTCGCTTTATTCC
ATGTGGGTTTTAATTAGGGTGGAATATCTTGCTCCCCCTCTTCAATTATTGGCCAATGTG
TGCATTGTCCTGTTTCTTATCCAGAGTTTGGATAGGTTAATCCTGTGTTTGGGTTGTTTC
TGGATAAAGATAAAGAATGTTAGGCCAGTTTTGAAATGCGGTCTAGTGGATCTTGAGGCT
GGTGATGGTGGTGGTTACTATCCCATGGTTCTTGTTCAAATCCCCATGTGTAATGAAAAA
GAGGTTTATCAGCAATCCATTGCAGCTGTGTGCAGTTTGGAGTGGCCTAAATCCAAACTA
TTGATTCAAATTCTTGATGATTCTGACGATTCCATGACTCAGACGTTGATCAAAGAGGAG
GTGCATAAATGGCAGAAGGATGGTGCAAACATTGTATACCGTCATAGGGTGATTAGAGAA
GGTTACAAAGCTGGCAATCTTAAGTCAGCCATGAATTGCAGCTATGTCAAAGACTATGAA
TTTGTTACCATTTTCGATGCAGATTTTCAGCCATCACCTGATTTTCTTAAGAGAACCGTT
CCTTATTTTAAGGATAATGAGGACCTAGGGTTGGTTCAAGCAAGGTGGTCGTTTGTGAAC
AAGGAGGAAAATCTTCTAACAAGACTGCAGCTTATTAATTTGGCATTTCATTTTGAAGTG
GAACAACAGGTGAATGGCATTTTTCTGAATTTCTTTGGATTTAACGGTACTGCTGGAGTA
TGGAGGATTAAGGCATTAGAAGGTTCTGGTGGTTGGATGGAGAGGACAACAGTTGAGGAT
ATGGACATTGCTGTTCGGGCACATCTTCACGGGTGGAAATTCATCTTTCTCAATGATGTA
GAGTGCCAGTGTGAATTACCAGAATCATACGAAGCATATCGGAAGCAACAACATAGATGG
CATTCAGGGCCAATGCAGTTATTCCGTCTTTGTTTGCCTGCCATTATTGAATCAAATATA
AGCATTTGGAAGAAGGGAAACTTGATATTTCTTTTCTTCCTTCTAAGGAAGCTGATACTG
CCATTTTATTCTTTCACCTTATTTTGTATAATCCTCCCCATGACCATGTTCATTCCTGAG
GCTACACTCCCGACATGGGTTGTCTGTTACATTCCTGCCACCATGTCGTTTCTCAATATA
CTTCCAGCCCCTAAATCTTTCCCTTTCGTTGTGCCATACCTTCTCTTCGAAAACACTATG
TCCGTGACCAAGTTCAATGCAATGATCTCAGGGCTTTTCCAACTTGGAAGCGCGTACGAA
TGGGTTGTAACAAAGAAATCAGGACGTTCTTCTGAGGGTGACCTTTCCTTGTTGGTTGAG
GGAAAACCAAAACATCAAAGAGGTATTTCGGAGCCTAATTTGGGAGACTTGAAGGAGGAA
ATTAAGAAGAAAGAGAGAAAGTCCTCGCGGAAGAAGAAGAAGCATAACAGAATATATACA
AAAGAATTGGCCTTGGCTTTCTTGCTGTTGACAGCTTCAGTGAGGAGCCTCCTATCAGCT
CAAGGAATCCACTTTTACTTCTTGTTGTTTCAAGGGATATCATTCCTGCTTGTCGGGCTA
GACTTGATCGGTGAACAGGTTGACTAG

Peptide Sequence

PEP ID

XP_016510105.1
PEP Infomation

PREDICTED: probable xyloglucan glycosyltransferase 12 [Nicotiana tabacum]
Sequence

MAQSFSWWGKEIQRGTPVVVKMENPNNWSMVELQSPSDDDFLLTKGEKVKNKNAKQLTWV
LLLKAHKAAGCLTSIASALFSLGSVIHRRVATGRTDSSTVNSRFYICIKVFLWLSLILLG
FEIAAYYKGWHFSASEFQIQHLYTLANPLAVKGVFDSLYSMWVLIRVEYLAPPLQLLANV
CIVLFLIQSLDRLILCLGCFWIKIKNVRPVLKCGLVDLEAGDGGGYYPMVLVQIPMCNEK
EVYQQSIAAVCSLEWPKSKLLIQILDDSDDSMTQTLIKEEVHKWQKDGANIVYRHRVIRE
GYKAGNLKSAMNCSYVKDYEFVTIFDADFQPSPDFLKRTVPYFKDNEDLGLVQARWSFVN
KEENLLTRLQLINLAFHFEVEQQVNGIFLNFFGFNGTAGVWRIKALEGSGGWMERTTVED
MDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIESNI
SIWKKGNLIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEATLPTWVVCYIPATMSFLNI
LPAPKSFPFVVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLSLLVE
GKPKHQRGISEPNLGDLKEEIKKKERKSSRKKKKHNRIYTKELALAFLLLTASVRSLLSA
QGIHFYFLLFQGISFLLVGLDLIGEQVD

Transcript Sequence

Gene sequence data has not been registered.